Gene Ther
Mol Biol Vol 1, 629-639. March, 1998.
Transcriptional regulation of the H-ras1 proto-oncogene by DNA binding
proteins: mechanisms and implications in human tumorigenesis
G. Zachos1,2 and D. A. Spandidos1,2
1 Institute of Biological Research
and Biotechnology, National Hellenic Research Foundation, 48 Vas. Constantinou
Ave., Athens 11635; 2 Medical School,
University of Crete, Heraklion, Greece.
______________________________________________________________________________________
Correspondence to: Professor D.A.
Spandidos, Tel/Fax: +(301)-722 6469
Summary
Altered expression of ras genes is a common event in human
tumors. Transcriptional regulation of the H-ras1 proto-oncogene occurs through
nuclear factors that recognize elements in the promoter region of the gene, in
the first and fourth intron and in the VTR unit and involves alternative
splicing and specific methylation patterns, as well. Aberrant levels of the Ras
p21 protein are detected in a variety of human tumors and are often correlated
with clinical and prognostic parameters. Thus, understanding the regulation of
the expression of ras genes provides a useful target for gene therapy
treatments.
I. Introduction
ras genes are a ubiquitous eukaryotic
gene family. They have been identified in mammals, birds, insects, mollusks,
plants, fungi and yeasts. Their sequence is highly conserved, thus revealing
the fundamental role they play in cellular proliferation (Spandidos, 1991).
A. The structure of ras genes
Three
functional ras genes
have been identified and characterized in the mammalian genome, H-ras1, K-ras2 and N-ras, as well as two pseudogenes, H-ras2 and K-ras1 (Barbacid, 1987). All three ras genes have a common structure with
a 5' non-coding exon (exon -I) and four coding exons (exons I-IV). The introns
of the genes differ widely in size and sequence, with the coding sequences of
human K-ras
spanning more than 35 kb, while those of N-ras and H-ras span approximately 7 and 3 kb,
respectively. The K-ras gene has two alternative IV coding exons, thus encoding two proteins,
K-RasA and K-RasB (McGrath et al, 1983), with the K-RasB form being more
abundant. The H-ras gene also has an alternative exon in the fourth intron (Cohen et al,
1989). In addition, H-ras has a variable tandem repeat sequence (VTR), located
downstream of the polyadenylation signal, which exhibits enhancer activity
(Spandidos and Holmes, 1987, Cohen et al, 1987).
B. Ras proteins: structural characteristics and
function
The H-Ras,
N-Ras and K-RasA proteins are 189 amino acids long, whereas K-RasB is shorter
by one amino acid. They all have a molecular weight of 21kDa and are termed p21
proteins. The p21 proteins are identical at the 86 N-terminal amino acid
residues, they possess an 85% homology in the next 80 amino acid residues and
diverge highly at the rest of the protein molecule, with the exception of the
four C-terminal amino acids which share the common motif CAAX-COOH (C, Cysteine
186; A, Aliphatic amino acid-Leucine, Isoleucine or Valine; X, Methionine or
Serine) (Lowy and Willumsen, 1991). The Ras protein is synthesized as pro-p21,
undergoes a series of post-translational modifications at the C-terminus
increasing the hydrophobicity of the protein and associates with the inner face
of the plasma membrane. Sequences at the C-terminus are essential for membrane
association and the conserved Cys 186 is required to initiate the
post-translational modifications of pro-p21 (Willumsen and Christensen, 1984).
The
superfamily of Ras proteins comprises a group of small GTPases, regulating an
astonishing diversity of cellular functions (Makara et al, 1996). They are
located at the heart of a signal transduction pathway that links cell-surface
receptors through a protein kinase cascade to changes in gene expression and
cell morphology and to cell division mechanisms. The Ras p21 protein interacts
directly with the Raf oncoprotein to recruit the MAP kinases and their
subordinates, thus converting a mitogenic signal initiated by membrane
receptors with tyrosine kinase activity to a cascade of Serine/ Threonine
kinases with multiple targets, including cytoskeleton, transcription factors,
inflammatory mediators and other kinases (Avruch et al, 1994, Marshall, 1995).
C. ras oncogenes: mechanisms of activation
The ras family of proto-oncogenes, is a
frequently detected family of transformation-inducing genes in human tumors.
Implication of ras
genes in human tumorigenesis occurs by four different mechanisms: point
mutations (Kiaris and Spandidos, 1995), gene amplification (Pulciani et al,
1985), insertion of retroviral sequences (Westaway et al, 1986) and alterations
in regulation of transcription (Zachos and Spandidos, 1997). With the exception
of mutations, all other mechanisms result in activation of the transforming properties
of ras genes by
quantitative mechanisms.
The
c-H-ras1 gene is
the best studied member of the family and provides a good example for
understanding the mechanisms of gene regulation. The H-ras proto-oncogene expression is
regulated by elements located in the promoter region, in intronic sequences and
in the 3' end of the gene. In addition, H-ras gene expression is regulated by
alternative mechanisms such as DNA methylation and alternative splicing
(reviewed by Zachos and Spandidos, 1997). Alterations in the H-ras expression levels are a common
mechanism of human tumorigenesis.
II. Transcriptional regulation of
the H-ras
gene from promoter-like sequences
The H-ras gene promoter contains multiple RNA
start sites, multiple GC boxes and has no characteristic TATA box (Ishii et al,
1985). These features are characteristic of housekeeping genes. Most promoter
region studies have focused on the region upstream of the 5' splice site of the
first intron of the gene (nucleotides 1-577), although others consider the SstI
fragment (nucleotides 1-1054) that encompasses a part of the first intron as
well, to be the gene promoter (Spandidos et al, 1988).
Regulation
of gene expression depends on a variety of nuclear factors (Boulikas, 1994). A
great number of regulatory elements in the H-ras promoter has been reported, but the
results were often controversial, depending on the followed experimental
procedure. Transcription factors that interplay on the regulatory regions of
the H-ras gene
promoter include Sp-1, NF-1, AP-1 and some unknown factors as well.
The Sp-1 is
a mammalian DNA binding protein activating transcription by interacting through
zinc finger domains with guanine-rich DNA sequences called GC boxes (Berg,
1992). The transcription factor AP-1 is the nuclear factor required to mediate
transcription induced by phorbol ester tumor promoters and recognizes a short
TGACTCA sequence (Lewin, 1991). Both c-Jun, encoded by members from the jun family (jun, junB, junD), and c-Fos proteins are active
components and contribute to the activity of AP-1 by forming c-Jun homodimers
as well as c-Jun-c-Fos heterodimers. In addition, there appears to be a mutual
antagonism between activation by AP-1 and glucocorticoid receptors at target
genes that contain recognition sites for both factors, via protein-protein
interactions (Yang-Yen et al, 1990). Finally, the NF-I (CTF) nuclear factor
binds the CCAAT element (CAAT box) and is involved in both gene transcription
and DNA replication. The NF-I C-terminal region is proline rich and activates
transcription through interference with the transcription machinery (Mermod et
al, 1989).
Ishii et al
(1986), identified six GC boxes that bind the Sp-1 transcription factor as the
essential regulatory elements within the H-ras promoter. Using deletion analysis
of the H-ras
promoter region by focus formation assay in NIH 3T3 cells, Honkawa et al (1987)
reported a minimum promoter region of 51 bp length, which was GC rich (78%) and
contained a GC box. Lowndes et al (1989) located a 47 bp element, distinct of
the one reported by Honkawa et al, that upregulated the transcriptional
activity of the promoter region by 20- to 40-fold and contained a GC box and a
CCAAT box, binding the NF-1 (CTF) factor. Transient expression assays in which
a series of mutants spanning the promoter region of H-ras were ligated to a promoterless
chloramphenicol acetyl transferase (CAT) vector, were used in this analysis.
Jones et al (1987), also identified two NF-I binding sites, one strong, also
noted by Honkawa et al, and one weak. Trimble and Hozumi (1987), using CAT
transfection experiments in CV-1 cells, identified a 100 nucleotide region,
encompassing the consensus CCAAT box and two Sp-1 sites. However, Nagase et al
(1990), using deletion mutants in CAT assays in CV-1 and A-431 cells, suggested
that the presence of Sp-1 binding sites at specific positions may not be
essential for promoter activity, but a number of Sp-1 binding sites in the
region could be required. Lee and Keller (1991), transfected recombinant
plasmids encompassing internal deletions and point mutations of the promoter
region in HeLa cells and performed CAT assays. They reported a GC box, an
unidentified element and a new element CCGGAA directly upstream the GC box, as
the most important regulatory elements. Spandidos et al (1988), using
recombinant plasmids in CAT activity experiments showed that AP-1-like proteins
participate in control of H-ras transcription and identified four TPA responsive-AP-1
binding elements in the H-ras promoter.
A great
variety of the transcription initiation sites was also identified (Lowndes et
al, 1989, Nagase et al, 1990,

Figure 1. A synopsis of the reported nuclear
factors participating in c-H-ras1 transcriptional regulation. Factors recognize sequences in
the H-ras promoter,
in intronic sequences and in the VTR region. Exons, rectangles; coding
sequences, filled rectangles; VTR, cross-hatched box; B, BamHI cleavage site;
S, SstI cleavage site; arrows, major transcriptional initiation sites; ?,
unknown regulatory factors; IDX, intron D exon.
Lee et al, 1991) using S1 nuclease
analysis. A synopsis of the reported nuclear factors that participate on the
promoter activity of H-ras, and of the major RNA start sites, are shown in Fig. 1.
III. Regulation of the H-ras gene expression from intronic
sequences
Intronic
sequences play an important role in H-ras regulation. The nuclear factor Sp-1, steroid hormone
receptors and the P53 onco-suppressor protein recognize sequences in the first
and fourth introns of the H-ras gene.
A. The Sp-1 box
There
is evidence that the mutant T24 ras 0.8 kb SstI DNA fragment is a more potent activator of gene
expression, compared to the corresponding normal H-ras fragment (Spandidos and Pintzas,
1988). A structural basis for this difference was shown to be a 6 bp element in
the mutant H-ras
fragment, that was absent in the normal H-ras, in the first intron of the gene.
This element was proved to contain an Sp-1 binding site (Pintzas and Spandidos,
1991) (Fig. 1).
B. The Hormone response elements (HREs)
Steroid
hormone receptors produce an enormous number of biological effects in different
tissues as hormone activated transcriptional regulators (Beato, 1989, Beato et
al, 1995). Such a process requires the coordinate expression of multiple genes and
likely candidates are signal transductors, capable of secondarily controlling
the transcription of sets of genes that lack steroid hormone response elements.
Proto-oncogenes are theoretically well suited for this role, as they exhibit
precise temporal patterns of expression during proliferation and
differentiation, they participate in signal transduction and regulate the
expression of multiple genes in a cascade fashion (Bishop, 1991). Thus, they
may integrate signals from steroids and other regulatory factors and amplify
the cellular response to the hormone. Evidence for steroid hormone regulation
of proto-oncogenes encoding for nuclear transcription factors has already been
provided for c-fos, c-jun and
c-myc (Hyder et
al, 1994).
1. Regulation of c-H-ras by
steroid hormone receptors
Zachos et al
(1995), identified
sequences in the 3' end of the first intron and in the fourth intron of the H-ras gene, with high similarity with the
glucocorticoid response element (GRE) and estrogen response element (ERE)
consensus oligonucleotides, respectively (Fig. 1). Using nuclear extracts from human
and murine cell lines in gel retardation assays, it was shown that both
glucocorticoid receptor (GR) and estrogen receptor (ER) specifically recognize
the corresponding H-ras elements (Zachos et al, 1995).
H-ras p21 protein, is a G-protein involved
in signal transduction beginning from transmembrane growth factor and peptide
receptors with tyrosine kinase activity (Avruch et al, 1994, Marshall et al,
1995). Steroid receptors, participate in dinstinct signalling mechanisms,
involving transcriptional regulation of genes by ligand activated receptors
(Beato, 1989, Beato et al, 1995). Thus, hormone regulation of H-ras provides evidence for a direct
interaction of these two pathways, allowing the cell to have an additional
regulatory "switch" by hormonally modulating the levels of G-proteins
at the transcriptional level (Zachos et al, 1996a).
Moreover,
the first intron of the gene contains well conserved regions between human and
rodents (Hashimoto-Gotoh et al, 1988) and encompasses positive and negative
elements influencing H-ras expression, possibly at post-transcriptional level
(Hashimoto-Gotoh et al, 1992). It is noteworthy that the GRE, as well as the
p53 element that will be discussed later, are located in the conserved region
of the intron, thus providing evidence for an essential role in regulating H-ras expression. Moreover, the H-ras GRE is located within the first
positive element.
2. Interaction of the H-ras and
steroid hormone receptors in gynecological cancer
The human
endometrium and ovary are major targets for action of glucocorticoids. Sex
hormones and steroids act as tumor promoters. The level of receptor binding in
H-ras hormone
response elements was examined in gel retardation assays, using nuclear
extracts from human endometrial and ovarian lesions and from adjacent normal
tissue (Zachos et al, 1996b). Increased binding of the glucocorticoid receptor
in H-ras GRE was
observed in more than 90% of endometrial and in all ovarian tumors tested,
compared to the adjacent normal tissue. Moreover, elevated binding of the
estrogen receptor in H-ras ERE was found in all pairs of ovarian tumor/ normal tissue
examined (Zachos et al, 1996b). Thus, it was proposed that H-ras is implicated in human gynecological lesions through
elevated steroid receptor binding.
In addition,
previous data showed cooperation of the H-ras with steroids in cell
transformation (Kumar et al, 1990) and overexpression of the Ras p21 in ovarian
tumors, compared to normal or benign tumor tissue (Katsaros et al, 1995). By
combining these data, it was proposed that the high levels of steroid and sex
hormones in human genital tract may result in increased amounts of ligand
activated steroid receptors. Furthermore, receptors bind to the H-ras DNA and induce elevated
transcription of the H-ras oncogene, resulting in an increased oncogenic potential.
Thus, endometrial and ovarian epithelial cells may have a predisposition to
develop neoplastic abnormalities in addition to a second tumorigenic event,
e.g. viral infection, loss of an onco-suppressor gene, or mutational activation
of a proto-oncogene (Zachos et al,
1996a).
C. The p53 element
One of the
major roles of wild-type P53 onco-suppressor protein is to trigger cell cycle
arrest or apoptosis in response to DNA damage by acting as a sequence specific
transcription factor that binds to DNA and activates genes involved in the
control of the cell cycle, including p21, gadd45, bax, mdm2 and PCNA (Zambetti et al, 1993,
Hainaut, 1995). The mutant forms of P53 promote tumorigenesis by
dominant-negative inhibition of wild-type P53 through cross-oligomerization.
Moreover, P53 mutants were proved to exert oncogenic functions of their own
(Dittmer et al, 1993).
1. Regulation of the c-H-ras by the P53 tumor-suppressor
protein
H-ras contains within its first intron sequences that partially
match the p53 consensus binding site (Fig. 1). Using gel retardation assays it
was shown that wild-type P53, as well as the "hot spot" mutant His
273 recognize the H-ras element with high affinity (Spandidos et al, 1995, Zoumpourlis et al,
1995). Furthermore, the H-ras element functioned as a P53-dependent transcriptional
enhancer in the context of a reporter plasmid, thus suggesting that P53 is a
physiological regulator of H-ras expression (Spandidos et al, 1995).
Activation
of H-ras
expression by P53 may seem a paradox, since p53 is a tumor suppressor and H-ras a proto-oncogene. However,
precedence has already been established for activation of proto-oncogenes by
P53. Wild-type P53 induces expression of mdm-2, whose protein product inhibits
the tumor suppressor activities of P53 and Rb (Xiao et al, 1995).
Interestingly, there are certain similarities in the organization of the p53
elements of the H-ras and mdm-2
genes, which are not shared with the p53 elements of other genes targeted by
P53. In H-ras
there are three half sites: two of them are contiguous, while the third is 8
nucleotides upstream. In mdm-2 there are again three half-sites: two are contiguous,
while the third one is located 28 nucleotides upstream (Wu et al, 1993). In
contrast to H-ras
and mdm-2, the
elements of the other genes regulated by P53 are contiguous. The organization
of the half-sites affects the ability of the P53 protein to recognize these
elements. Wild-type P53 reversibly switches between two conformations: the
"inactive" T state, with dihedral symmetry, which can recognize only
non-contiguous half-sites and the "active" R state, which can
recognize even contiguous half-sites (Waterman et al, 1995). Thus, it is
suggested that H-ras and mdm-2
genes allow regulation by even the "inactive" T state of P53 protein.
The H-ras p53 element is located within the
first intron. Interestingly, the
p53 element of the mdm-2 is also located in the first intron of the gene (Wu et al, 1993). The
significance of this is not understood at this time. The mdm-2 has an internal promoter in the
first intron. Transcripts initiating at both promoters contain the entire
protein sequence, however they differ in the efficiency with which translation
is initiated in codon 1. Thus, transcripts that include the first exon mostly
express an N-terminally truncated Mdm-2 protein, whereas transcripts from the
internal promoter express a full-length protein. P53 induces expression only
from the internal promoter and only the full-length form can associate with
P53, closing the autoregulatory feedback loop (Barak et al, 1994). It remains
to be determined whether P53 induces expression of transcripts initiating at
the first intron of H-ras, as well as the biological significance of such
transcripts.
The p53
tumor suppressor may therefore exert its cellular effects by coordinate
activation of genes that suppress and induce cell proliferation.
2. Altered
binding of p53 protein to the H-ras element in human tumors
Mutation and
overexpression of the p53 tumor suppressor is a common event in human
endometrial and ovarian cancer (Berchuck et al, 1994) and is associated with
poor prognosis (Levesque et al, 1995, Kihana et al, 1995). Moreover, aberrant
regulation of the H-ras gene expression also participates in the development of human
gynecological lesions (Zachos and Spandidos, 1997).
Using
nuclear extracts from human endometrial and ovarian tumors and from the
adjacent normal tissue in gel retardation assays, we examined the binding
levels of the P53 protein to the H-ras element (our unpublished results). Elevated P53
binding in the tumor tissue was found in 5/11 (45%) of endometrial and in 2/5
(40%) of ovarian cases. Loss of P53 DNA binding activity was observed in 3/11
(27%) of endometrial and in 1/5 (20%) of ovarian tumors. In the remaining 3/11
(27%) of endometrial and in 2/5 (40%) of ovarian pairs tested, no alteration in
the P53 binding levels was observed. In order to interpret the results, all
pairs were subsequently tested for mutations in exons 4-9 of the p53 gene using
PCR-SSCP analysis. No mutation was observed in any case showing elevated DNA
binding activity, thus implying for overexpression of the wild-type p53 gene in
these tumors. In addition, no p53 mutational alteration was observed in the
cases showing similar DNA binding levels in tumor versus the adjacent normal
tissue. However, a mutated allele was detected in all four endometrial and ovarian
cases showing loss of P53 DNA binding activity. We therefore suggest that P53
could directly modulate the H-ras oncogenic potential in human endometrial and ovarian
lesions, depending on the expressed levels of P53 and the status of the protein
(wild-type or mutated forms), thus providing additional evidence for the role
of H-ras in
human carcinogenesis.
IV. The
role of the VTR
Variable
tandem repeats (VTRs, minisatellites) are highly polymorphic structures
characterized by the tandem repetition of short (up to 100 bp) sequence motifs.
Several observations on tandemly-repetitive elements within viral genomes
(Yates et al, 1984) have led to the speculation that some human minisatellites
might serve as regulatory regions for cellular transcription or replication.
A. The H-ras minisatellite sequence as transcriptional
enhancer
The human H-ras gene contains a VTR region located
1 kb upstream the polyadenylation signal (Fig. 1). It consists of 30 to 100 copies
of a 28 bp consensus repeat. Four common alleles and more than 25 rare alleles
have been described (Krontiris et al, 1993). It was shown that the H-ras VTR sequences possess endogenous
enhancer activity, independently
from orientation, however this activity is promoter specific (Spandidos and
Holmes, 1987, Cohen et al, 1987). The 28 bp repeat unit of the minisatellite
binds four proteins (p45, p50, p72 and p85) which are members of the rel/ NF-kB family of transcriptional
regulatory factors (Trepicchio and Krontiris, 1992).
B. VTR rare alleles of the H-ras and ovarian
cancer risk
Women who
carry a mutation in the BRCA1 gene have an 80% risk of breast cancer and a 40% risk of
ovarian cancer by the age of 70 (Easton et al, 1995). The varying penetrance of
BRCA1 suggests a
role for other genetic and epigenetic factors in tumorigenesis of these
individuals. H-ras
was the first example of a modifying gene on the penetrance of an inherited
cancer syndrome. Rare alleles of the H-ras VTR locus duplicate the magnitude of ovarian cancer
risk for BRCA1
carriers, but not the risk for developing breast cancer (Phelan et al, 1996).
It was suggested that H-ras VTR alleles show differences in modulating gene
transcription, that H-ras VTR alleles are in linkage disequilibrium with other genes
important in tumorigenesis, or that rare alleles provide a marker for genomic
instability (Phelan et al, 1996).
V. The role of the DNA
methylation status
DNA
methylation is essential for embryonic development and alterations in the DNA
methylation status are common in cancer cells. CpG sites in vertebrates are
either clustered in 0.5-2 kb regions called
Table
I. ras gene overexpression in human
tumors and correlation with clinical parameters.
|
Tumor
type |
Frequency (%) |
ras gene |
Stage
in tumorigenesis |
Prognosis
of the disease |
|
Neuroblastoma |
50-80 |
H-,
ras |
early |
favourable |
|
Head
and neck |
54 |
H-,
K- |
early |
favourable |
|
Esophagus |
40 |
H- |
unknown |
unknown |
|
Larynx |
57-86 |
H-,
K-, N- |
unknown |
unknown |
|
Thyroid |
85 |
ras |
early |
unknown |
|
Lung |
64-85 |
ras |
late |
poor |
|
Liver |
60 |
ras |
unknown |
unknown |
|
Small
intestine |
70 |
ras |
unknown |
unknown |
|
Stomach |
35 |
K-,
ras |
late |
poor |
|
Pancreas |
42 |
ras |
unknown |
unknown |
|
Colon |
31 |
H-,
K-, ras |
early |
poor |
|
Breast |
65-70 |
ras |
unknown |
unknown |
|
Bladder |
39-58 |
H-,
K-, N- |
early |
poor |
|
Endometrium |
18-95 |
ras |
late |
unknown |
|
Ovary |
45 |
ras |
late |
poor |
|
Leukemias |
39-67 |
H-,
K-, N- |
unknown |
unknown |
CpG islands, or are dispersed, in
which case they are mostly methylated and constitute mutational hotspots
(Jones, 1996). The CpG islands are associated with gene promoters (e.g. H-ras) or coding regions (e.g. p16) and are unmethylated in
autosomal genes. 5' Methyl-cytosine can affect transcription by altering the
DNA binding activities of transcription factors. This could be done either
directly, for example binding of trans-acting proteins at AP-2 sites is inhibited (Comb and
Goodman, 1990), or indirectly, by enhanced binding of methylated DNA binding
protein (MDBP) which stereochemically inhibits DNA binding of transcription
factors (Boyes and Bird, 1991).
The promoter
region of the H-ras gene is hypomethylated in human tumors compared to the corresponding
normal tissue (Feinberg and Vogelstein, 1983). Furthermore, methylation of
cis-elements
decreases H-ras
promoter activity in vitro (Rachal et al, 1989) and inhibits the transforming activity
of the oncogene (Borello et al, 1987). It is therefore suggested that
epigenetic and reversible mechanisms, like DNA methylation, can regulate the
expression of proto-oncogenes and silence genetically activated human
oncogenes.
VI.
Differential expression of the H-ras gene is controlled by alternative splicing
A
proportion of H-ras pre-mRNA is spliced to incorporate an alternative exon, termed IDX
(intron D exon), which contains an in-frame translational termination codon
that prevents expression of the genetic information specified by the exon IV as
shown in Fig. 1
(Cohen et al, 1989). The abundance of these transcripts is low, apparently due
to message instability or defective processing. The predicted product of the
alternate transcript (p19) lacks transforming potential, since the C terminal
sequence of p21 that is necessary for attachment of the protein to the inner
site of the cellular membrane is absent. It is suggested that alternative
splicing patterns operate to suppress the H-ras p21 expression. This negative control
is abolished by mutations that interfere with this process.
VII. Overexpression of ras genes in human tumors
Overexpression
of ras genes is
a common event in human tumors (reviewed by Zachos and Spandidos, 1997). Table
I summarizes the
experimental results by indicating the tumor type where elevated expression of ras genes was observed, the frequency
of the overexpression, the activated member of the ras gene family, the stage in
tumorigenesis and correlation of altered ras gene expression with prognosis of
the disease. Where no particular ras gene is mentioned (referred as: ras), no discrimination between the ras family members was performed, nor
was their status (mutated or wild-type alleles) defined.
Elevated
ras gene
expression was observed in human neuroblastomas (Spandidos et al, 1992), head
and neck tumors (Field, 1991), esophageal (Abdelatif et al, 1991), laryngeal
(Kiaris et al, 1995), thyroid (Papadimitriou et al, 1988), lung (Miyamoto et
al, 1991), liver (Tiniakos et al, 1989), small intestine (Spandidos et al,
1993), stomach (Motojima et al, 1994), pancreatic (Song et al, 1996),
colorectal (Spandidos and Kerr, 1994), breast (Dati et al, 1991), bladder
(Ting-jie et al, 1991), endometrial

Figure 2. A synopsis of molecular therapeutic
strategies developed against activated ras oncogenes. Strategies include antisense
oligonucleotides, ribozymes, farnesyltransferase inhibitors and activation of
T-cell response after mutant Ras peptide vaccination of patients.
(Long et al, 1988) and ovarian tumors
(Scambia et al, 1993) and in leukemias (Gougopoulou et al, 1996). The frequency
of elevated expression of the ras family of
genes varies from 30% in endometrial and colorectal tumors, to 85-90% of cases
in endometrial, lung and laryngeal tumors. In a number of tumors including
neuroblastomas, head and neck, thyroid, colorectal and bladder cancers, ras overexpression is considered to be
an early genetic event. However, in lung, stomach, endometrial and ovarian
lesions, overexpression of ras genes appears in a later stage in tumorigenesis. Elevated
expression of the Ras p21 protein is correlated with poor prognosis in lung,
stomach, colorectal, bladder and ovarian lesions, whereas it is a favourable
marker for neuroblastomas and head and neck tumors.
VIII. Molecular
therapeutic strategies
The
development of effective molecular strategies for therapy is the aim of tumor
biology. Current therapeutic strategies include ribozymes against mutant ras gene products, antisense
strategies, inhibitors of Ras protein post-translational modifications and Ras
peptide vaccination (Fig. 2).
A. Ribozymes
Molecular
biology applies the site-specific RNAse properties of ribozymes to gene therapy
for cancer. The anti-ras ribozymes are designed to cleave only activated ras RNA (Fig. 2). To develop this strategy into
practical means, methods must be developed to accomplish high efficiency
delivery of the ribozyme to target neoplastic tissue. An adenoviral-mediated
delivery was designed (Feng et al, 1995). Using anti-Ras ribozymes, it was
possible to reverse the neoplastic phenotype in mutant H-ras expressing tumor cells with high
efficiency (Kashani-Sabet et al, 1994).
B. Antisense strategies
The
antisense strategy involves reduction of a particular gene expression by introduction
of a cDNA segment in antisense orientation, in order to bind the target mRNA
and prevent its translation (Stein and Cheng, 1993) (Fig. 2). Critical to the success of such
an antisense agent is its ability to enter living cells, to specifically bind
the target mRNA and induce RNAse-H cleavage of the target RNA. Activated ras genes, by mutation or
overexpression, are a common target of these therapeutic trials in cell-free
and in vitro
systems (Monia et al, 1992, Schwab et al, 1994).
C. Inhibitors of Ras
post-translational modifications
Farnesylation
of the CAAX motif of Ras protein is essential for the subcellular localization
of Ras to the plasma membrane and is critical to Ras cell-transforming
activity. Inhibitors of farnesyltransferase have been developed as potential
cancer therapeutic agents (Gibbs et al, 1994) (Fig. 2). Requirements for Ras
farnesylation inhibitors include specificity for farnesyl protein transferase,
ability to inhibit post-translational modifications of the mutant ras specifically, high potency,
activity in vivo
and lack of toxicity (Kelloff et al, 1997).
D. Ras peptide vaccination
Ras
peptide vaccination is a recent, developing molecular strategy for cancer
therapy. Mutant Ras peptides are candidate vaccines for specific immunotherapy
in cancer patients. An amount of mutant Ras p21 is degraded in the cytoplasm
and fragments are attached with class I MHC glycoproteins, in the outer surface
of the cell membrane (Fig. 2). When vaccinated with a synthetic Ras peptide representing
the ras mutation
in tumor cells, a transient Ras-specific T-cell response is induced, towards
the fragments of mutant Ras protein associated with MHC molecules. Ras peptide
vaccination was proved to be effective in 40% of patients with pancreatic
cancer (Gjertsen et al, 1995, 1996). However, peptide vaccination of patients,
like all other gene therapy strategies previously mentioned, requires
considerable development before useful anti-cancer agents can emerge.
IX. Concluding remarks
Regulation
of the c-H-ras1
gene expression is a complicated procedure, including regulation by a variety
of regulatory proteins (transcription factors, hormone receptors,
tumor-suppressor proteins), alternative mechanisms (methylation, splicing) and
by sequences located in the promoter region, in introns and downstream of the
coding sequence. Understanding the molecular mechanisms of the expression of ras genes is of great significance for
studying human tumorigenic events and developing effective strategies for gene
therapy.
References
Abdelatif
OMA, Chandler FW, Mills LR, McGuire BS, Pantazis CG and Barret JM (1991) Differential expression of c-myc and H-ras oncogenes in Barret's epithelium-a
study using colorimetric in situ hybridazation. Arch Pathol Lab Med 115, 880-885.
Avruch
J, Zhang X and Kyriakis JM (1994) Raf meets Ras: completing the framework of a signal
transduction pathway. TIBS 19, 279-283.
Barak
Y, Gottlieb E, Juven-Gershon T and Oren M (1994) Regulation of mdm2 expression by
p53: alternative promoters produce transcripts with nonidentical translation
potential. Genes Dev 8, 1739-1749.
Barbacid
M (1987) ras genes. Ann Rev Biochem 56, 779-827.
Beato
M, Herrlich P and Schutz G (1995) Steroid hormone receptors: many actors in search of a
plot. Cell 83,
851-857.
Beato
M (1989) Gene
regulation by steroid hormones. Cell 56, 335-344.
Berchuck A, Kohler MF,
Marks JR, Wiseman R, Boyd J and Bast RC (1994) The p53 tumor suppressor gene is
frequently altered in gynecologic cancers. Am J Obstet Gynecol 170, 246-252.
Berg JM (1992) Sp1 and the subfamily of zinc
finger proteins with guanine-rich binding sites. Proc Natl Acad Sci USA 89, 11109-11110.
Bishop
JM (1991)
Molecular themes in oncogenesis. Cell 64, 235-248.
Borello
MG, Pierotti MA, Bongarzone I, Donghi R, Modellini P and Della Porta G (1987) DNA methylation affecting the
transforming activity of the human Ha-ras oncogene. Cancer Res 47, 75-79.
Boyes
J and Bird A (1991)
DNA methylation inhibits transcription indirectly via a methyl-CpG binding
protein. Cell 64,
1123-1134.
Boulikas T (1994) A compilation and classification of
DNA binding sites for protein transcription factors from vertebrates. Crit
Rev Eukaryot Gene Exp
4, 117-321.
Cohen
JB, Broz SD and Levinson AD (1989) Expression of the H-ras proto-oncogene is controlled by
alternative splicing. Cell 58, 461-472.
Cohen
JB, Maureen VW and Levinson AD (1987) A repetitive sequence element 3' of the human c-Ha-ras1 gene has enhancer activity. J
Cell Physiol (Suppl)
5: 75-81.
Comb
M and Goodman HM (1990) CpG methylation inhibits proenkephalin gene expression and binding of
the transcription factor AP-2. Nucleic Acids Res 18, 3975-3982.
Dati
C, Muraca R, Tazartes O, Antoniotti S, Perrotean I, Giai M, Cortese P, Sismondi
P, Saglio G and DeBortoli M (1991) c-ErbB-2 and Ras expression levels in breast cancer are
correlated and show a cooperative association with unfavorable clinical
outcome. Int J Cancer 47: 833-838.
Dittmer
D, Pati S, Zambetti G, Chu S, Teresky AK, Moore M, Finlay C and Levine AJ (1993) Gain of function mutations in p53. Nat
Genet 4, 42-46.
Easton
D, Ford D and Bishop D (1995) Breast and ovarian cancer incidence in BRCA1 mutation
carriers. Am J Hum Genet 56, 265-271.
Feinberg
AP and Vogelstein B (1983) Hypomethylation of ras oncogenes in primary human cancers. Biochem Biophys Res
Commun 198, 47-54.
Feng
M, Cabrera G, Deshane J, Scanlon KJ and Curiel DT (1995) Neoplastic reversion accomplished
by high efficiency adenoviral-mediated delivery of an anti-ras ribozyme. Cancer Res 55, 2024-2028.
Field
JK (1991)
Prognostic implications of ras oncogene expression in head and neck squamous cell
carcinoma. In: DA Spandidos, ed. The superfamily of ras related genes: New York, Plenum
Press, 213-226.
Gibbs
JB, Oliff A and Kohl NE (1994) Farnesyltransferase inhibitors: Ras research yields a
potential cancer therapeutic. Cell 77, 175-178.
Gjertsen
MK, Bakka A, Breivik J, Saeterdal I, Gadde-Dahl T 3rd, Stokke KT, Salheim BG,
Egge TS, Soreide O, Thorsby E and Gaudernack G (1996)Ex vivo ras peptide vaccination in patients
with advanced pancreatic cancer: results of a phase I/II study. Int J Cancer 65, 450-453.
Gjertsen
MK, Bakka A, Breivik J, Saeterdal I, Solheim BG, Soreide O, Thorsby E and
Gaudernack G (1995)
Vaccination with mutant ras peptides and induction of T-cell responsiveness in
pancreatic carcinoma patients carrying the corresponding RAS mutation. Lancet 346, 1399-1400.
Gougopoulou DM, Kiaris H, Ergazaki M, Anagnostopoulos NI,
Grigoraki Y and Spandidos DA (1996) Mutations and expression of the ras family genes in leukemias. Stem
Cells 14, 725-729.
Hainaut
P (1995) The
tumor suppressor protein p53: a receptor to genotoxic stress that controls cell
growth and survival. Curr Opin Oncol 7, 76-82.
Hashimoto-Gotoh
T, Kikuno R, Takahashi M and Honkawa H (1988) Possible role of the first intron
of c-H-ras in
gene expression: anti-cancer elements in oncogenes. Anticancer Res 8, 851-860.
Hashimoto-Gotoh
T, Takahashi M, Kikuno R, Ishihara H and Tezuka K (1992) Unusual sequence conservation in
intron-1 of c-H-ras
oncogene and its effect on p21 protein synthesis. In: Spandidos DA, ed. Current
Perspectives of Molecular Cellular Oncology. London: JAI Press, 211-230.
Honkawa
H, Masahashi W, Hashimoto S, and Hashimoto-Gotoh T (1987) Identification of the principal
promoter sequence of the c-Ha-ras transforming oncogene: deletion analysis of the 5' flanking
region by focus formation assay. Mol Cell Biol 7, 2933-2940.
Hyder
SM, Stancel GM and Loose-Mitchell DS (1994) Steroid hormone-induced expression of oncogene
encoded nuclear proteins. Crit Rev Eucaryot Gene Expr 4, 55-116.
Ishii
S, Kadonaga JT, Tjian R, Brandy JN, Merlino GT and Pastan I (1986) Binding of the Sp1 transcription
factor by the human Harvey ras1 proto-oncogene promoter. Science 232, 1410-1413.
Ishii
S, Merlino GT and Pastan I (1985) Promoter region of the human Harvey ras proto-oncogene: Similarity to the
EGF receptor proto-oncogene promoter. Science 230, 1378-1381.
Jones
PA (1996) DNA
methylation errors and cancer. Cancer Res 56, 2463-2466.
Kashani-Sabet
M, Funato T, Florenes VA, Fostad O and Scanlon KJ (1994) Suppression of the
neoplastic phenotype in vivo by an anti-ras ribozyme. Cancer Res 54, 900-902.
Katsaros
D, Theillet C, Zola P, louason G, Sanfilippo B, Isaia E, Arisio R, Giardina G
and Sismondi P (1995) Concurrent abnormal expression of erbB-2, myc and ras genes is associated with poor
outcome of ovarian cancer patients. Anticancer Res 15, 1501-1510.
Kelloff GJ,
Lubet RA, Fay JR, Steele VE, Boone CW, Crowell JA and Sigman CC (1997) Farnesyl protein transferase
inhibitors as potential cancer chemopreventives. Cancer Epidemiol Biomarkers
Prev 6, 267-282.
Kiaris
H and Spandidos DA (1995) Analysis of H-ras, K-ras and N-ras genes for expression, mutation and amplification in
laryngeal tumours. Int J Oncol 7, 75-80.
Kiaris
H and Spandidos DA (1995) Mutations of ras genes in human tumors (Review). Int J Oncol 7, 413-421.
Kihana T, Hamada K,
Inoue Y, Yano N, Iketani H, Murao S, Ukita M and Matsuura S (1995) Mutation and allelic loss of the
p53 gene in endometrial carcinoma. Cancer 76, 72-78.
Krontiris
TG, Devlin B, Karp DD, Robert NJ and Risch N (1993) An association between the risk of
cancer and mutations in the HRAS 1 minisatellite locus. N Eng J Med 329, 517-523.
Kumar
R, Sukumar S and Barbacid M (1990) Activation of ras oncogenes preceding the onset of neoplasia. Science 248, 1101-1104.
Lee W
and Keller EB (1991)
Regulatory elements mediating transcription of the human Ha-ras gene. J Mol Biol 220, 599-611.
Levesque MA, Katsaros
D, Yu H, Zola P, Sismondi P, Giardina G and Diamantis EP (1995) Mutant p53 overexpression is
associated with poor outcome in patients with well or moderately differentiated
ovarian carcinoma. Cancer 75, 1327-1338.
Lewin B (1991) Oncogenic conversion by regulatory
changes in transcription factors. Cell 64, 303-312.
Long
CA, O'Brien TJ, Sanders MM, Bard DS and Quirk JG Jr (1988) ras oncogene is expressed in
adenocarcinoma of the endometrium. Am J Obstet Gynecol 159: 1512-1516.
Lowndes
NF, Paul J, Wu J and Allan M (1989) c-Ha-ras gene bidirectional promoter expressed in vitro. Mol Cell Biol 9: 3758-3770.
Lowy
DR and Willumsen BM (1993) Function and regulation of ras. Annu Rev Biochem 62, 851-891.
Macara IG,
Lounsbury KM, Richards SA, McKiernan C and Bar-Sagi D (1996) The Ras superfamily of GTPases. FASEB
J 10, 625-630.
Marshall
MS (1995) Ras
target proteins in eucaryotic cells. FASEB J 9, 1311-1318.
McGrath
JP, Capon DJ, Smith DH, Chen EY, Seeburg PH, Goeddel PV and Levinson AD (1983) Structure and organization of the
human Ki-ras
proto-oncogene and a related processed pseudogene. Nature 304, 501-506.
Mermod N,
O'Neill EA, Kelly TJ and Tjian R (1989) The proline-rich transcriptional activator of
CTF/NF-I is dinstict from the replication and DNA binding domain. Cell 58, 741-753.
Miyamoto
H, Harada M, Isobe H, Akita HD, Haneda H, Yamaguchi E, Kuzumaki N and Kawakami
Y (1991)
Prognostic value of nuclear DNA content and expression of the ras oncogene product in lung cancer. Cancer
Res 51, 6346-6350.
Monia
BP, Johnston JF, Eckers DJ, Zounes MA, Lima WF and Freier SM (1992) Selective inhibition of mutant Ha-ras mRNA expression by antisense
oligonucleotides. J Biol Chem 267, 19954-19962.
Motojima
K, Furui J, Kohara N, Izawa K, Kanematsu T and Shiku H (1994) Expression of Kirsten-ras p21 in gastric-cancer correlates
with tumor progression and is prognostic. Diagn Mol Pathol 3, 184-191.
Nagase
T, Ueno Y and Ishii S (1990) Transcriptional control of the human Harvey ras proto-oncogene: role of multiple
elements in the promoter region. Gene 94, 249-253.
Papadimitriou
K, Yiagnisis M, Tolis G and Spandidos DA (1988) Immunohistochemical analysis of the
ras oncogene protein in human thyroid neoplasms. Anticancer Res 8, 1223-1228.
Phelan
CM, Rebbeck TR, Weber BL, Devilee P, Ruttledge MH, Lynch HT, Lenoir GM,
Stratton MR, Easton DF, Ponder BA, Cannon-Albright C, Larsson C, Goldgar DE and
Narod SA (1996)
Ovarian cancer risk in BRCA1 carriers is modified by the HRAS1 variable number of tandem repeat
(VNTR) locus. Nat Genet 12, 309-311.
Pintzas
A and Spandidos DA (1991) Sp1 specific binding sites within the human H-ras promoter: potential role of the 6 bp
deletion sequence in the T24 H-ras1 gene. Anticancer Res 11: 2067-2070.
Pulciani
S, Santos E, Long LK, Sorrentino V and Barbacid M (1985)ras gene amplification and malignant
transformation. Mol Cell Biol 5, 2836-2841.
Rachal
MJ, Yoo H, Becker FF and Lapeyre J-N (1989) In vitro DNA cytosine methylation of cis-regulatory
elements modulates c-Ha-ras promoter activity in vivo. Nucleic Acids Res 17, 5135-5147.
Scambia
G, Catozzi L, Panici PB, Ferrandina G, Coronetta F, Barazzi R, Baiocchi G,
Uccelli L, Piffanelli A and Mancuso S (1993) Expression of ras oncogene p21 protein in normal and
neoplastic ovarian tissues: correlation with histopathologic features and
receptors for estrogen, progesterone and epidermal growth factor. Am J
Obstet Gynecol 168,
71-78.
Schwab
G, Chavany C, Duroux I, Goubin G, Lebeau J, Helene C and Saison-Bechmoaras T (1994) Antisense oligonucleotides adsorbed
to polyalkylcyanoacrylate nanoparticles specifically inhibit mutated Ha-ras-mediated cell proliferation and
tumorigenicity in nude mice. Proc Natl Acad Sci USA 91, 10460-10464.
Song MM, Nio
Y, Sato Y, Tamura K and Furuse K (1996) Clinicopathological significance of Ki-ras point mutation and p21 expression in
benign and malignant exocrine tumors of the human pancreas. Int J Pancreatol 20, 85-93.
Spandidos
DA, Arvanitis D and Field JK (1992) Ras p21 expression in neuroblastomas and
ganglio-neuroblastomas: correlation with patients' prognosis. Int J Oncol 1, 53-58.
Spandidos
DA, Zoumpourlis V, Zachos G, Toas SH and Halazonetis TD (1995) Specific recognition of a
transcriptional element within the human H-ras proto-oncogene by the p53 tumor
suppressor. Int J Oncol 7, 1029-1034.
Spandidos
DA and Holmes L (1987) Transcriptional enhancer activity in the variable tandem repeat DNA
sequence downstream of the human Ha-ras1 gene. FEBS Lett 218, 41-46.
Spandidos
DA and Kerr IB (1994) Elevated expression of the human ras oncogene family in premalignant and
malignant tumours of the colorectum. Br J Cancer 49, 681-688.
Spandidos
DA, Liloglou T, Arvanitis D and Gourtsoyiannis NC (1993) ras gene activation in human small
intestinal tumors. Int J Oncol 2, 513-518.
Spandidos
DA, Nichols RAB, Wilkie NM and Pintzas A (1988) Phorbol ester-responsive H-ras1 gene promoter contains multiple
TPA-inducible/ AP-1-binding consensus sequence elements. FEBS Lett 240, 191-195.
Spandidos
DA and Pintzas A (1988) Differential potency and trans-activation of normal and mutant T24
human H-ras1 gene
promoters. FEBS Lett 232, 269-274.
Spandidos
DA (1991) The
superfamily of ras-related
genes. New York: Plenum Press, 1-338.
Stein
CA and Cheng YC (1993) Antisense oligonucleotides as therapeutic agents - is the bullet really magical? Science 261, 1004-1012.
Ting-jie
M, Ze W and Nianli S (1991) Correlation between the expression of the p21 ras oncogene product and the biological
behavior of bladder tumors. Eur Urol 20, 307-310.
Tiniakos
D, Spandidos DA, Kakkanas A, Pintzas A, Pollice L and Tiniakos G (1989) Expression of ras and myc oncogenes in human hepatocellular
carcinoma and non-neoplastic liver tissues. Anticancer Res 9, 715-722.
Trepicchio WL
and Krontiris TG (1992) Members of the rel/ NF-kB family of transcriptional regulatory proteins bind the HRAS1 minisatellite DNA sequence. Nucleic
Acids Res 20,
2427-2434.
Trimble
WS and Hozumi N (1987) Deletion analysis of the c-Ha-ras oncogene promoter. FEBS Lett 219, 70-74.
Yang-Yen H-F,
Chambard J-C, Sun Y-L, Smeal T, Schmidt TJ, Drouin J and Karin M (1990) Transcriptional interference
between c-Jun and the glucocorticoid receptor: mutual inhibition of DNA binding
due to direct protein-protein interaction. Cell 62, 1205-1215.
Yates J,
Warren, N, Reisman D and Sugden B (1984) A cis-acting element from the Epstein-Barr viral
genome that permits stable replication at recombinant plasmids in latently
infected cells. Proc Natl Acad Sci USA 81, 3806-3810.
Waterman JLF,
Shenk JL and Halazonetis TD (1995) The dihedral symmetry of the p53 tetramerization domain
mandates a conformational switch upon DNA binding. EMBO J 14, 512-519.
Westaway
D, Parkoff J, Moscovici C and Varmus HE (1986) Identification of a provirally
activated c-Ha-ras oncogene in an avian nephroblastoma via a novel procedure:
cDNA cloning of a chimaeric viral-host transcript. EMBO J 5, 301-309.
Willumsen
BM and Christensen A (1984) The p21 ras C-terminus is required for transformation and membrane
association. Nature
310, 583-586.
Wu X, Bayle
JH, Olson D and Levine AJ (1993) The p53-mdm2 autoregulatory feedback loop. Genes Dev 7, 1126-1132.
Zachos G and
Spandidos DA (1997)
Expression of ras
proto-oncogenes: regulation and implications in the development of human
tumors. Crit Rev Oncol Hematol 26, 65-75.
Zachos
G, Zoumpourlis V, Sekeris CE and Spandidos DA (1995) Binding of the glucocorticoid and
estrogen receptors to the human H-ras oncogene sequences. Int J Oncol 6, 595-600.
Zachos G,
Varras M, Koffa M, Ergazaki M and Spandidos DA (1996a) The association of the H-ras oncogene and steroid hormone
receptors in gynecological cancer. J Exp Ther Oncol 1, 335-341.
Zachos G,
Varras M, Koffa M, Ergazaki M and Spandidos DA (1996b) Glucocorticoid and estrogen
receptors have elevated activity in human endometrial and ovarian tumors as
compared to the adjacent normal tissues and recognize sequence elements of the
H-ras
proto-oncogene. Jpn J Cancer Res 87, 916-922.
Zambetti
GP and Levine AJ (1993) A comparison of the biological activities of wild-type and mutant p53.
FASEB J 7,
855-865.
Zoumpourlis
V, Zachos G, Halazonetis TD, Ergazaki M and Spandidos DA (1995) Binding of wild-type and mutant
forms of P53 protein from human tumors to a specific DNA sequence of the first
intron of the H-ras
oncogene. Int J Oncol 7, 1035-1041.