Gene Ther Mol Biol Vol 3,
25-33. August 1999.
Establishment of an assay to
determine adenovirus-induced endosome rupture required for receptor-mediated
gene delivery
Research Article
Daniela Schober, Nora Bayer,
Robert F. Murphy1, Ernst Wagner2 and Renate Fuchs
Department of General and
Experimental Pathology, University of Vienna, A-1090 Vienna, Austria
1Department of Biological Sciences, Carnegie Mellon University,
Pittsburgh, USA
2Boehringer Ingelheim R&D Vienna, A-1121 Vienna, Austria
__________________________________________________________________________________________________Correspondence: Renate Fuchs, Department of General and Experimental Pathology,
University of Vienna, Whringer Grtel 18-20, A-1090 Vienna, Austria. Phone:
+43-1-40-400-5127; Fax: +43-1-40-400-5130; E-mail: renate.fuchs@akh-wien.ac.at
Key words: adenovirus entry, endosome
rupture, flow cytometry
Received: 9 October 1998;
accepted: 19 October 1998
Summary
Successful human gene therapy requires methods to
transfer recombinant genes to cells efficiently. One possibility is to use
adenoviral-based vectors. The entry route of adenovirus involves endocytic
uptake, penetration of modified viral particles into the cytoplasm by endosome
rupture, transport to the nuclear pore complex, disassembly of modified
particles and import of the DNA into the nucleus. Since endosome rupture is a
rate-limiting step in foreign gene expression, we developed a two-step assay to
quantitative virus-mediated membrane rupture. Following endosome labeling of
HeLa cells with a pH-sensitive (FITC-dextran) and pH-insensitive (Cy5-dextran)
fluid-phase marker in the absence or presence of replication-defective
adenovirus type 5 (Ad5), first, the pH of labeled compartments was determined
by flow-cytometry of cell suspensions. When compared to control cells, the pH
of labeled compartments was elevated by co-internalization of Ad5 indicating
endosome lysis and penetration of the marker into the pH-neutral cytoplasm.
Second, single-organelle flow analysis (SOFA) of cell homogenates of the same
cells was applied to quantitate the amount of labeled as well as unlabeled
vesicles in the presence of Ad5. Our results demonstrate that adenovirus
internalized for 10 min into HeLa cells destroys about 30% of endosomal compartments.
This assay can be applied to rapidly screen various gene delivery systems for
their ability to disrupt endosomal membranes and to enter the cytoplasm.
I. Introduction
Adenovirus (Ad) is widely used as a vehicle to deliver foreign DNA into
the cell of interest. This is due to the broad expression of adenoviral
receptors on human cells and the particular mechanism of uncoating of this
virus. 47 serotypes of adenoviruses have been characterized and classified into
6 subgroups (A - F). Adenovirus is a non-enveloped virus with an icosahedral
capsid shell and protruding fibers anchored to the penton base proteins. The
linear double stranded DNA is attached to four core proteins. In contrast to
other DNA viruses, adenovirus infects non-dividing cells and replicates in the
nucleus but rarely integrates into the host genome. Expression of foreign genes
can be achieved by direct DNA insertion into the viral genome or conjugation to
the virus. Moreover, replication deficient adenoviruses have been generated that
can be propagated in cell lines expressing the comple-menting viral proteins
(Graham et al., 1977; Jones and Shenk, 1979). Recombinant adenoviruses have also been used for gene
transfer (Fujita et al., 1995).
So far, the internalization pathway and mechanism of uncoating of
adenoviruses of subgroup C (e.g. Ad2 and Ad5) are fairly well characterized,
although not fully understood at the molecular level. After binding to primary
cellular receptors (MHC-class I complex and coxsackievirus-adenovirus receptor)
via the distal portion of its fiber protein (Bai et al., 1994; Bergelson et
al., 1997; Hong et al., 1997), subsequent internalization of the virus requires
binding of five RGD motifs in the penton base to avb-integrins (Wickham et al., 1993; Nemerow et al., 1994). Following
endocytosis via clathrin coated pits and vesicles (Wang et al., 1998),
adenovirus undergoes a series of modifications of its capsid proteins in the
low pH environment of endosomes that ultimately results in rupture of the
endosomal membrane (Greber et al., 1993). The low pH-dependent, virus-induced
endosome lysis also requires the presence of avb-integrins (Wickham et al., 1994). During endocytosis and penetration
into the cytoplasm, capsid proteins are degraded or dissociated and finally the
DNA core is freed from the hexon (Greber et al., 1993; Greber et al., 1996).
Binding of the DNA core to the nuclear pore complex results in its disassembly
and import of the viral genome into the nucleus (Greber and Kasamtsu, 1996;
Greber et al., 1997). Thus, the capacity of adenovirus to rupture the endosome
and the selective targeting of viral DNA to the nucleus provides a powerful
vehicle for gene transfer (Curiel et al., 1991; Wagner et al., 1992; Wagner,
1998).
Adenovirus has long been known to increase the permeability of the
plasma or endosomal membrane at low pH (Seth et al., 1985; Seth, 1994). In this
process, co-internalized macromolecules can gain access to the cytoplasm. Using
an in vitro assay (a so-called endosome leakage assay), we have recently shown
that adenovirus leads to release of small and large molecules from isolated
endosomes when incubated in low pH buffer (Prchla et al., 1995). Although this in vitro assay allows
determination of conditions required for endosomal content release, it is
laborious and time consuming.
Since efficient gene transfer primarily depends on endosome rupture, we
sought to establish a rapid assay to determine the endosomolytic activity of
adenovirus in vivo. Macromolecules and viruses taken up by endocytosis are
exposed to the low pH environment of the endosomes due to the activity of the
vacuolar proton ATPase (Mellman et al., 1986; Mukherjee et al., 1997). Therefore, we took advantage of the
pH-dependence of FITC-derivatives to selectively label endosomes and measured
endosomal pH using flow cytometry and the dual fluorescence (dual fluorochrome)
ratio method (Murphy et al., 1984; Cain and Murphy, 1986). Flow cytometry can
also be applied to resolve distinct fluorescent endocytic vesicles in cell
homogenates, a method termed single-organelle flow analysis (SOFA) (Murphy,
1985, 1990; Murphy et al., 1989; Wilson and Murphy, 1989).
In the present study we co-internalized replication-defective
adenovirus type 5 (Ad5) together with pH-sensitive (FITC) and pH-insensitive
(Cy5) derivatives of the fluid-phase marker dextran into HeLa cells. The pH of labeled compartments was
determined by flow cytometry and, in addition, the integrity of total vesicles
and fluorescent endosomes was evaluated by SOFA. Using these techniques, we here demonstrate that Ad5
elevates the pH of labeled compartments, suggesting endosome lysis and access
of the dextran into the pH neutral cytoplasm. This conclusion was verified by SOFA, in that a reduction in
the number of labeled as well as unlabeled vesicles in the presence of Ad5 was
observed. The results confirm the
utility of these flow cytometric methods for monitoring adenovirus-induced
endosome lysis.
II. Results
A. Flow cytometry
of HeLa cell endosomes
Fluid-phase
markers are non-specifically internalized into cells and can therefore be used
to label all endocytic vesicles, depending on the internalization conditions
applied (time, temperature). Furthermore, fluid-phase markers do not bind to
cellular membranes and are released into the cytoplasm when endosomes are lysed
(Yoshimura, 1985; Defer et al., 1990). Under control conditions, internalized
markers will be exposed to the low pH environment of intact endosomes whereas in
the presence of membrane disrupting agents they will be released into the
pH-neutral cytoplasm (see Fig. 1).
Figure 1. Receptor mediated adenovirus
entry and virus-induced endosome rupture.
Figure 2. Experimental set-up for FACS
and SOFA analysis of HeLa cells infected with adenovirus type 5 (Ad5) in the
presence of FITC- and Cy5-dextran.
Figure 3. Normalized pH calibration curves of
FITC/Cy5-dextran labeled endosomes obtained by flow cytometry of cell suspensions
and post-nuclear supernatants (PNS), respectively. HeLa cell endosomes were labeled as described in Fig. 2. Cell suspensions or PNS were
incubated with pH buffers containing permeant anions and azide to deplete
cellular ATP and nigericin to equilibrate internal with external pH.
We
therefore internalized a pH-sensitive (FITC) and insensitive (Cy5) derivative
of the fluid-phase marker dextran (MW 70 kD) in the presence or absence of Ad5
(1000 particles / cell) into HeLa cells for 10 min at 34ĄC, followed by a 10
min chase in marker-free medium (for experimental set-up see Fig. 2). Under this condition primarily late endocytic compartments will
be labeled with the marker (Schober et al., 1998). Flow cytometry of cell
suspensions was then used to determine the amount of internalized marker
(reflected by Cy5 fluorescence) and endosomal pH (reflected by the ratio of
FITC and Cy5 fluorescence). The total amount of marker internalized was found
to be stimulated by adenovirus by 40% when compared to controls.
For pH
measurements, a standard curve was generated for each sample by measuring the
FITC/Cy5 ratio as a function of external pH. As shown in Fig. 3, increasing the
pH of the external medium (in the presence of permeant ions) from 4.5 to 7.5
results in a linear increase in the FITC/Cy5 ratio. Based on this calibration
curve, an average endosomal pH of 6.3 +/- 0.1 was obtained when marker was
internalized in the absence of Ad5 (Fig.
4). When Ad5 was co-internalized with the dextran, the pH of labeled
compartments was increased to 7.3 +/- 0.1, suggesting virus-induced endosome
rupture and release of internalized marker into the pH neutral cytoplasm.
B. Single-organelle
flow analysis (SOFA) of HeLa cells infected with adenovirus
To verify whether the increase
of the "endosomal" pH of labeled compartments in the presence of
adenovirus is due to loss of internalized fluid-phase marker from acidic
organelles such as endosomes, we applied single-organelle flow analysis (SOFA).
When a cell homogenate or post-nuclear supernatant (PNS) is subjected to SOFA,
the following parameters can be analyzed at the same time: forward scatter (FS)
and side scatter (SS), both of which are related to size and optical density,
and FITC- and Cy5-fluorescence (Wilson and Murphy, 1989). Using these parameters the following
information can be obtained: (i)
size distribution and number of vesicles of a certain size; (ii) the degree of co-localization of
two distinct fluorescent markers; and (iii)
the internal pH of individual vesicles. Our goal was to determine (for cells
treated and untreated with adenovirus) the number of total endocytic vesicles
(unlabeled and fluorescent), the number of fluorescent endosomes, and the
average pH of intact endosomes.
When
measuring the properties of subcellular organelles by SOFA, a criterion must be
chosen to define which objects in an organelle suspension are to be analyzed.
This is normally accomplished by using a threshold on a light scattering
parameter (FS or SS), since both fluorescent and
Figure 4. Influence of adenovirus on
the pH of labeled compartments of HeLa cells. HeLa cell endosomes were labeled
with FITC/Cy5-dextran without or with Ad5 as described in Fig. 2. Cell suspensions were analyzed by flow cytometry and the internal
pH was calculated using the pH calibration curve shown in Fig. 3. Values depicted are the mean +/- SD from 3 independent
experiments.
non-fluorescent objects can
be detected in this fashion. In
order to reproducibly measure endocytic vesicles, a method for choosing a
consistent threshold is needed. As
described previously (Wilson and Murphy, 1989), we chose a threshold value of
SS just above the maximum value observed when sheath fluid without sample was
analyzed.
As an
illustration of the SOFA method, all endocytic compartments (endosomes,
lysosomes, recycling vesicles) of HeLa cells were labeled by continuous
internalization of FITC-and Cy5-dextran for 2 h at 34ĄC. Thereafter, cells were rapidly cooled,
washed and homogenized with a ball-bearing homogenizer ensuring minimal
destruction of vesicles during homogenization (Balch and Rothman, 1985). Nuclei
and unbroken cells were removed by centrifugation and the resulting PNS was
subjected to SOFA (see Materials and Methods). For control purposes, a PNS was prepared from unlabeled
cells and also analyzed by SOFA.
To differentiate large vesicles (such as late endosomes) from small
vesicles, an analysis window was created with a lower FS value just above the
maximum observed for sheath fluid alone (as above for SS). As depicted in Fig. 5 and Table 1,
about 29% of the total events (objects) detected in both unlabeled (Fig. 5A) and labeled (Fig. 5E) samples were in this large
vesicle window, while about 61% of all events fell in a corresponding window
for small vesicles. In histograms displaying the fluorescence parameters, a
region defining events positive for FITC and/or Cy5 fluorescence was created to
exclude essentially all events from unlabeled cell homogenates. When either
large or small vesicles from Fig. 5A
were depicted in dual fluorescence histograms, a minute number (0.2%) of
vesicles from unlabeled cells were detected in the fluorescence-positive
region (Fig. 5B and F). This confirmed that the region was appropriately
defined. (Fig. 5C). In the PNS of FITC/Cy5-dextran labeled
HeLa cells, 64% of all vesicles counted (small and large) were fluorescent (Fig. 5G, Table 1). However,
whereas the majority (83%) of the large vesicles contained FITC/Cy5-dextran (Fig. 5F), only 47% of the small vesicles
were fluorescent (Fig. 5H, Table 1).
Thus, nearly all large vesicles can be defined as endocytic vesicles due to
labeling with internalized fluorescent fluid-phase marker. Consequently, the
number of vesicles in this population was used as one indication of endosome
disruption by adenovirus.
Having
defined the flow-cytometer settings to analyze endosomes, FITC- and Cy5-dextran
was internalized into HeLa cells in the absence or presence of Ad5 (10 min
pulse, 10 min chase) as in Fig. 2.
Cell homogenates were prepared, centrifuged at low speed and the resulting
supernatant (PNS) was subjected to SOFA. As shown in Fig. 6A, the total number of large vesicles was reduced by
co-internalization of Ad5 to 69% of controls. Further support for endosome
lysis due to adenovirus entry is
Figure 5. Selection of gates to define
small, large and fluorescent vesicles for SOFA. All endocytic compartments in
HeLa cells were labeled by continuous internalization with 2 mg / ml FITC-dextran
and 0.1 mg / ml Cy5-dextran for 2 h at 37ĄC. A post-nuclear supernatant was
prepared as described in Materials and Methods and subjected to SOFA (E-H). Results for a post-nuclear supernatant from unlabeled HeLa
cells are also shown (A-D).
Table 1. Quantitation of large, small
and fluorescent vesicles in post nuclear supernatants analyzed by SOFA. The
data presented in Fig. 5 are
summarized and expressed as % of total events counted (Fig. 5B, D, F, H). In addition, when endosomes had been labeled
with FITC/Cy5-dextran (Fig. 5E, F, H)
fluorescent vesicles were also normalized to the amount observed in the
respective FS gate for large and small vesicles.
Figure 6. Adenovirus internalization
reduces the number of large vesicles (A)
and fluorescent endosomes (B).
FITC/Cy5-dextran was internalized into HeLa cells in the absence or presence of
Ad5 as described in Fig. 2. A PNS
was prepared and analyzed by SOFA. (A)
The number of total large vesicles was determined based on FS and SS histograms
(as in Fig. 5A). (B) The number of large fluorescent
endosomes in scatter-gated histograms of FITC and Cy5 fluorescence is shown (as
in Fig. 5F). Data are expressed as
percent of the corresponding values obtained in the absence of virus.
Figure 7. Influence of adenovirus on
the internal pH of residual intact endosomes. The internal pH of large
fluorescent endosomes for the samples in Fig.
6B was calculated using the pH calibration curve shown in Fig. 3.
provided when bona fide
endosomes, i.e. fluorescent vesicles, are analyzed. In Ad5-infected cells, the
number of FITC/Cy5-positive endosomes was decreased to 73% of controls (Fig. 6B). This demonstrates that quantitation of large vesicles by
SOFA can be used to reflect endosome rupture.
Finally,
the influence of adenovirus on the average internal pH of residual intact
endosomes was determined. Endosomes maintain their low intravesicular pH after
cell homogenization at 4ĄC for up to 20 h in the absence of highly permeant ions
(Fuchs et al., 1989; Wilson and Murphy, 1989). A pH calibration curve similar to that obtained for whole
cells was created for endosomes in the PNS analyzed by SOFA (Fig. 3). Using this calibration curve,
an average internal pH of 6.0 +/- 0.1 was found for large vesicles (endosomes)
from control cells (Fig. 7), while
co-internalization of Ad5 slightly decreased the pH of residual intact
endosomes (5.5 +/- 0.2). This
confirms that the increase in pH of labeled compartments observed in cell
suspensions by flow cytometry is indeed due to release of internalized marker
into the cytoplasm, rather than to alteration of endosomal pH per se.
III. Discussion
We here
demonstrate that flow cytometry is a rapid and sensitive technique that can be
used to analyze the endosome-disrupting potential of adenovirus. The two-step
analysis involves 1/ determination of endosomal pH of labeled compartments by
flow cytometry of cell suspensions, and 2/ SOFA of cell homogenates of the same
cells. The first analysis indicates the potential endosome leakage induced by
the virus that it then verified and quantified by SOFA. Our results show that
short co-internalization (10 min) of Ad5 and fluid-phase marker results in
rupture of about 30 % of endocytic vesicles.
Adenoviruses
of subgroup B and C have been shown to increase the rate of fluid-phase uptake
and in addition to permeabilize the plasma or endosomal membrane for small and
large molecules (Yoshimura, 1985; Otero and Carrasco, 1987). In particular,
adenoviruses type 2 and 5 (subgroup C) are known to enter the cytoplasm by
endosome lysis. Comparison of the data presented in this investigation with
previous studies are difficult, because in former studies large quantities of
adenovirus (2000 - 5000 particles / cell) were used and the internalization
conditions applied resulted in labeling of early and late endosomes as well as
of lysosomes (Defer et al., 1990). Furthermore, permeabilization of the plasma
membrane could not be differentiated from endosome rupture. Adenovirus-mediated
enhancement of cytoplasmic delivery has mainly been analyzed using toxins or
toxin-conjugates that inhibit protein synthesis (Seth, 1994). So far,
adenovirus-induced endosome rupture in vivo (i.e. the number of endosomes
lysed) has not been quantitated.
Our
results show that relatively small amounts of Ad5 (1000 particles / cell) when
co-internalized for 10 min with the fluid-phase marker dextran and chased for
an additional 10 min (to label late endosomes but not lysosomes (Prchla et al.,
1994)) stimulated dextran uptake by 40%. This is in good agreement with
published data (Defer et al., 1990). Under the same conditions, the virus
destroyed about 30% of all endocytic compartments. Since the number of large
vesicles in FS/SS histograms primarily reflect endocytic compartments (Fig. 5 and Table 1), the endosomolytic activity of a given agent can be
rapidly analyzed without prior endosome labeling with fluorescent tracers.
Thus, this system offers the advantage to rapidly screen DNA-delivery systems
such as low pH activated liposomes for their ability to lyse endosomes and to
enter the cytosol.
Using
adenovirus as gene delivery system one has to bear in mind that destruction of
endosomes will also affect subsequent endocytic uptake of nutrients, hormones,
and growth factors as well as signaling events from endosomes. So far, it is
unknown how rapidly the endosomal system is regenerated after adenovirus
internalization. Presumably, this may depend on whether for the particular cell
of interest, transport to lysosomes occurs by endosome maturation or by carrier
vesicles (Murphy, 1993; Gruenberg and Maxfield, 1995). We intend to apply SOFA to investigate
the recovery of the endocytic system after adenovirus infection.
Acknowledgments
This
work was supported by Austrian Science Foundation grants P-10618-MED and
P-12967-GEN to R.F.
IV. Materials and
Methods
B. Cell culture and virus propagation
HeLa cells (Wisconsin strain, kindly provided by R.
Rueckert, University of Wisconsin) were grown in monolayers in MEM-Eagle
(GIBCO) containing heat-inactivated 10% fetal calf serum; in suspension culture
Joklik's MEM (GIBCO) supplemented with 7% horse serum was used. Adenovirus
serotype 5 mutant dl 312 (Ad5), a replication incompetent strain deleted in the
E1a region was propagated in 293 cells (Graham et al., 1977; Jones and Shenk,
1979).
C. Endosome labeling for flow cytometry
HeLa suspension cells (2x107) were
preincubated in 2 ml DMEM containing 10% FCS for 30 min at 37ĄC. For labeling
of all endocytic compartments, HeLa cells were incubated in 2 ml fresh medium
with serum containing 2 mg / ml FITC-dextran and 0.1 mg / ml Cy5-dextran for 2
h at 37ĄC. To determine the influence of adenovirus on endosomal pH and
endosome integrity, endosomes were labeled by incubation of HeLa cells in 2 ml
DMEM containing 10% FCS, 6 mg / ml FITC-dextran, and 1 mg / ml Cy5-dextran
without or with Ad5 (MOI of 1000) for 10 min at 34ĄC followed by a 10 min chase
in DMEM in the absence or presence of Ad5. Internalization was halted by
addition of ice-cold PBS (pH 7.4), pelleting the cells and washing the pellet
twice with 30 ml ice cold PBS. The final cell pellet was resuspended in 2 ml
PBS and divided into 7 aliquots. One aliquot (further diluted with PBS to 500 ml) was analyzed immediately
by flow cytometry, the remaining aliquots were used for generation of the pH
calibration curve (see below).
D.
Preparation of post-nuclear supernatant (PNS) for SOFA
All manipulations were
carried out at 4ĄC. Following endosome labeling, the cells were washed twice
with 50 ml PBS and pelleted. The cell pellet was resuspended in 4 vol. PBS and
homogenized with a ball-bearing homogenizer (Balch and Rothman, 1985). The
resulting homogenate was centrifuged for 15 min at 4300 g (Rotixa/RP,
Hettich) to obtain the post-nuclear supernatant (PNS). The PNS was diluted 1:5
with PBS (pH 7.4) and immediately subjected to SOFA and generation of the pH
standard curve, respectively (Murphy et al., 1989; Wilson and Murphy, 1989;
Murphy, 1990).
D. Generation of pH standard curves and
calculation of internal pH for flow cytometry and SOFA
50 ml aliquots of cells or PNS
were resuspended in 250 ml of buffers of various pH.
Buffers (pH 4.5, 5.0, 5.5, 6.0, 6.5, 7.0, 7.5) were obtained by mixing
50 mM HEPES with 50 mM MES (both containing 50 mM NaCl, 30 mM ammonium acetate,
40 mM sodium azide and 1 mM nigericin) accordingly. The samples were left on ice for 5 min for
ATP-depletion and for equilibration of intravesicular pH.
E. Calculation of the pH of labeled
compartments
The mean fluorescence value
for each fluorochrome of experimental samples (8 parallels) and samples of the
pH standard curve (duplicates) was calculated and the corresponding mean
autofluorescence of unlabeled cells was subtracted from each. The ratio of the
resulting average FITC and Cy5 values was calculated for each condition and
normalized to the value obtained for that sample after clamping at pH 7.5. Finally, the average pH of labeled
compartments was determined using the pH calibration curve.
F. Flow cytometry
A dual laser FACS Calibur (Becton Dickinson
Immunocytometry Systems) equipped with argon-ion and red-diode lasers was
used. FITC-fluorescence (488 nm
excitation) was measured using a 530 nm band pass filter (30 nm band width) and
Cy5-fluorescence (635 nm excitation) was measured using a 661 nm band pass
filter (16 nm band width). Forward
light scatter and 90Ą (side)-scatter, along with both fluorescence values, were
collected in list mode using 256-channel resolution. For flow cytometry of cell
suspensions, data for 10.000 cells were collected, while 100.000 events per
sample were collected for SOFA. The following threshold parameters were defined
for SOFA (see also Results and Fig. 5): 1/ Forward scatter (FS) and side
scatter (SS): As described (Wilson and Murphy, 1989), a threshold value of SS
just above the maximum value observed when sheath fluid without sample was
analyzed was chosen. To differentiate large vesicles (such as late endosomes)
from small vesicles, an analysis window was created with a lower FS value just
above the maximum observed for sheath fluid alone (as above for SS). 2/ FITC
and Cy5 fluorescence: In dual fluorescence histograms, threshold parameters
were set after analyzing the PNS of unlabeled cells. Thus, a region was defined
for FITC and/or Cy5 fluorescence positive events.
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